Resources
12 results for "clinical medicine"
Database
Contributor Review
BRATECA (Brazilian Tertiary Care Dataset): a Clinical Information Dataset for the Portuguese Language
Computational medicine research requires clinical data for training and testing purposes, so the development of datasets composed of real hospital data is of utmost importance in this field. Most such data collections are in the English language, we…
Model
Credentialed Access
Fine-tuning foundational models to code diagnoses from veterinary health records
Veterinary medical records represent a large data resource for application to veterinary and One Health clinical research efforts. Use of the data is limited by interoperability challenges including inconsistent data formats and data siloing. Clinic…
Database
Contributor Review
Chest Computed Tomography for patients with sepsis in the Emergency Department
Sepsis is a systematic inflammatory response syndrome that can impact all vital organs. Lung is the most commonly involved organ that sepsis can cause lung injury. Lung injury can have a variety clinical presentations and can be captured by chest im…
Database
Credentialed Access
DrugEHRQA: A Question Answering Dataset on Structured and Unstructured Electronic Health Records For Medicine Related Queries
Electronic Health Records (EHR) contain patient records, stored in structured tables as well as unstructured clinical notes. The information in structured and unstructured EHR records is not strictly disjoint: information may be duplicated, contradi…
Database
Credentialed Access
MIMIC-IV-Ext-MDS-ED: Multimodal Decision Support in the Emergency Department - a Benchmark Dataset for Diagnoses and Deterioration Prediction in Emergency Medicine
Measurable progress in the development of medical decision support systems has been hindered by a lack of comprehensive datasets. Many available datasets focus on narrow prediction tasks and do not include a diverse range of data types, which limits…
Database
Credentialed Access
Phenotype Annotations for Patient Notes in the MIMIC-III Database
A crucial step within secondary analysis of electronic health records (EHRs) is to identify the patient cohort under investigation. While EHRs contain medical billing codes that aim to represent the conditions and treatments patients may have, much …
Database
Restricted Access
Community-Acquired Pneumonia, Endotypes and Phenotypes (NACef): Prospective, observational cohort study of Translational Medicine
Community-Acquired Pneumonia (CAP) remains a prominent infectious process associated with elevated in-hospital morbidity and mortality rates. Through the exploration of phenotypes, endotypes, and biomarkers, it becomes feasible to identify individua…
Database
Credentialed Access
FFA-IR: Towards an Explainable and Reliable Medical Report Generation Benchmark
Automatic medical report generation (MRG) towards describing life-threatening lesions from given medical images, such as Chest X-ray and Fundus Fluorescein Angiography (FFA), has been a long-standing research topic in machine learning and automatic …
Database
Open Access
Myocardial perfusion scintigraphy image database
This database provides a collection of myocardial perfusion scintigraphy images in DICOM format with all metadata and segmentations (masks) in NIfTI format. The images were obtained from patients undergoing scintigraphy examinations to investigate c…
Database
Credentialed Access
Immunosuppressive Condition and Medication Annotations for Admission Notes in the MIMIC-III Database
Immunosuppression due to underlying conditions or immunosuppressive medication use increases the risk of morbidity and mortality in the context of infectious disease. Identifying patients with immunosuppression is important for better studying and u…