Resources
Database Credentialed Access
DrugEHRQA: A Question Answering Dataset on Structured and Unstructured Electronic Health Records For Medicine Related Queries
Jayetri Bardhan, Anthony Colas, Kirk Roberts, Daisy Zhe Wang
Published: April 12, 2022. Version: 1.0.0
Database Contributor Review
CARMEN-I: A resource of anonymized electronic health records in Spanish and Catalan for training and testing NLP tools
Eulalia Farre Maduell, Salvador Lima-Lopez, Santiago Andres Frid, Artur Conesa, Elisa Asensio, Antonio Lopez-Rueda, Helena Arino, Elena Calvo, Maria Jesús Bertran, Maria Angeles Marcos, Montserrat Nofre Maiz, Laura Tañá Velasco, Antonia Marti, Ricardo Farreres, Xavier Pastor, Xavier Borrat Frigola, Martin Krallinger
de-identification anonymization clinical ner
Published: Nov. 2, 2023. Version: 1.0
Database Credentialed Access
Curated Data for Describing Blood Glucose Management in the Intensive Care Unit
Aldo Robles Arévalo, Roselyn Mateo-Collado, Leo Anthony Celi
insulin replacement therapy glycemic control critical care
Published: April 19, 2021. Version: 1.0.1
Database Credentialed Access
NCH Sleep DataBank: A Large Collection of Real-world Pediatric Sleep Studies with Longitudinal Clinical Data
Harlin Lee, Boyue Li, Yungui Huang, Yuejie Chi, Simon Lin
eeg ehr polysomnography pediatrics clinical decision support sleep disorders sleep study electronic health records ecg
Published: Oct. 27, 2021. Version: 3.1.0
Database Credentialed Access
MIMIC-III and eICU-CRD: Feature Representation by FIDDLE Preprocessing
Shengpu Tang, Parmida Davarmanesh, Yanmeng Song, Danai Koutra, Michael Sjoding, Jenna Wiens
preprocessing machine learning electronic health record
Published: April 28, 2021. Version: 1.0.0
Database Credentialed Access
BOLD, a blood-gas and oximetry linked dataset
João Matos, Tristan Struja, Jack Gallifant, Luis Filipe Nakayama, Marie Charpignon, Xiaoli Liu, Jaime dos Santos Cardoso, Leo Anthony Celi, An Kwok Wong
electronic health records health equity pulse oximetry intensive care unit
Published: Nov. 8, 2023. Version: 1.0
Database Credentialed Access
NCH Sleep DataBank: A Large Collection of Real-world Pediatric Sleep Studies with Longitudinal Clinical Data
Harlin Lee, Boyue Li, Yungui Huang, Yuejie Chi, Simon Lin
eeg ehr polysomnography pediatrics clinical decision support sleep disorders sleep study electronic health records ecg
Published: Oct. 27, 2021. Version: 3.1.0
Challenge Credentialed Access
BioNLP Workshop 2023 Shared Task 1A: Problem List Summarization
Yanjun Gao, Dmitriy Dligach, Timothy Miller, Majid Afshar
bionlp clinical natural language processing electronic health record summarization
Published: Nov. 12, 2023. Version: 2.0.0
Database Open Access
MIMIC-IV Clinical Database Demo
Alistair Johnson, Lucas Bulgarelli, Tom Pollard, Steven Horng, Leo Anthony Celi, Roger Mark
mimic critical care electronic health record
Published: Jan. 31, 2023. Version: 2.2
Database Credentialed Access
Annotation dataset of problematic opioid use and related contexts from MIMIC-III Critical Care Database discharge summaries
Melissa Poulsen, Vanessa Troiani, Philip Freda, Danielle Mowery, Anahita Davoudi
clinical notes substance use opioid use disorder natural language processing
Published: Feb. 8, 2023. Version: 1.0.0