Resources
55 results for "electronic health records"
Database
Credentialed Access
MIMIC-IV-Ext-CLIF: MIMIC-IV in the Common Longitudinal ICU data Format (CLIF)
MIMIC-IV-Ext-CLIF is a derived dataset of MIMIC-IV v3.1, transformed into the Common Longitudinal ICU data Format (CLIF). CLIF is an open-source critical care data model developed by a consortium of more than 10 US academic medical centers to standa…
Database
Credentialed Access
MIMIC-IV-Ext-MedicalBench: Evaluating Large Language Models Towards Improved Medical Concept Extraction
Medical concept extraction from electronic health records underpins many downstream applications, yet remains challenging because medically meaningful concepts, such as diagnosis, are frequently implied rather than explicitly stated in medical narra…
Database
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Antibiotic Resistance Microbiology Dataset Mass General Brigham (ARMD-MGB)
The Antibiotic Resistance Microbiology Dataset – MGB (ARMD-MGB) is a de-identified resource derived from electronic health records (EHR) that facilitates research in antimicrobial resistance (AMR). ARMD-MGB encompasses data collected from over 225,0…
Database
Credentialed Access
Multimodal Clinical Monitoring in the Emergency Department (MC-MED)
Emergency department (ED) patients often present with undiagnosed complaints, and can exhibit rapidly evolving physiology. Therefore, data from continuous physiologic monitoring, in addition to the electronic health record, is essential to understan…
Database
Credentialed Access
MIMIC-Ext-DrugDetection
This project shares a large, annotated drug detection dataset created from MIMIC-III/IV discharge summaries. The dataset was developed to address the challenge of identifying substance use behaviors in Electronic Health Records (EHRs), where critica…
Database
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MIMIC-IV-Ext-Instr: A Dataset of 450K+ EHR-Grounded Instruction-Following Examples
Large language models (LLMs) have shown impressive capabilities in solving a wide range of tasks based on human instructions. However, developing a conversational AI assistant for electronic health record (EHR) data remains challenging due to the la…
Database
Credentialed Access
Immunosuppressive Condition and Medication Annotations for Admission Notes in the MIMIC-III Database
Immunosuppression due to underlying conditions or immunosuppressive medication use increases the risk of morbidity and mortality in the context of infectious disease. Identifying patients with immunosuppression is important for better studying and u…
Database
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SCRIPT X2B8 Dataset: per-day clinical features to model successful next-day extubation
Criteria to identify patients who are ready to be liberated from mechanical ventilation are imprecise, often resulting in prolonged mechanical ventilation or reintubation, both of which are associated with adverse outcomes. We sought to determine wh…
Database
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TherLid: A Thermometry Linked Dataset
A recent study showed that infrared (IR) sensors may be prone to calibration discrepancies among darker-pigmented patients. Similar disparities have already been verified in pulse oximetry. This raises questions about whether thermometry measurement…
Database
Credentialed Access
ENCoDE, mEasuring skiN Color to correct pulse Oximetry DisparitiEs: skin tone and clinical data from a prospective trial on acute care patients.
The wide adoption of pulse oximeters has given clinicians an easy, non-invasive way to measure arterial oxygen saturation. However, evidence suggests that pulse oximeter measurements have a deeper discrepancy in patients of darker skin tones compare…