Resources
165 results for "mimic"
Database
Credentialed Access
MIMIC-IV-ECHO-Ext-MIMICEchoQA: A Benchmark Dataset for Echocardiogram-Based Visual Question Answering
We present MIMICEchoQA, a benchmark dataset for echocardiogram-based question answering, built from the publicly available MIMIC-IV-ECHO database. Each echocardiographic study was paired with the closest discharge summary within a 7-day window, and …
Database
Open Access
MIMIC-IV demo data in the Medical Event Data Standard (MEDS)
This dataset is an automated ETL conversion of the MIMIC-IV Clinical Database Demo into the Medical Event Data Standard (MEDS). MEDS is a data schema for storing streams of medical events such as those sourced from Electronic Health Records or claim…
Database
Credentialed Access
MIMIC-Ext-DrugDetection
This project shares a large, annotated drug detection dataset created from MIMIC-III/IV discharge summaries. The dataset was developed to address the challenge of identifying substance use behaviors in Electronic Health Records (EHRs), where critica…
Database
Credentialed Access
Immunosuppressive Condition and Medication Annotations for Admission Notes in the MIMIC-III Database
Immunosuppression due to underlying conditions or immunosuppressive medication use increases the risk of morbidity and mortality in the context of infectious disease. Identifying patients with immunosuppression is important for better studying and u…
Database
Credentialed Access
MIMIC-III-Ext-tPatchGNN
This dataset is a curated subset of MIMIC-III (v1.4), specifically formatted to facilitate reproducibility of the experiments in the work t-PatchGNN. It serves as part of a benchmark designed for forecasting irregular multivariate clinical time seri…
Database
Credentialed Access
MIMIC-IV-Ext-BHC: Labeled Clinical Notes Dataset for Hospital Course Summarization
This dataset presents a curated collection of preprocessed and labeled clinical notes derived from the MIMIC-IV-Note database. The primary aim of this resource is to facilitate the development and training of machine learning models focused on summa…
Database
Restricted Access
MIMIC-IV-Ext-DiReCT
Large language models (LLMs) have recently demonstrated remarkable capabilities across a broad spectrum of tasks and applications, including the medical field. Models like GPT-4 excel in medical question answering but encounter challenges in interpr…
Database
Credentialed Access
MIMIC-IV-Ext-GPT-3_5-Generated-Discharge-Summaries-for-Low-Resource-Codes
This dataset comprises 9,606 Synthetic Discharge Summaries generated by GPT-3.5 based on combinations of ICD-10-code descriptions associated with real discharge summaries in MIMIC-IV. As part of the generation process, GPT-3.5 was also tasked to cod…
Database
Credentialed Access
MIMIC-IV-Ext-MDS-ED: Multimodal Decision Support in the Emergency Department - a Benchmark Dataset for Diagnoses and Deterioration Prediction in Emergency Medicine
Measurable progress in the development of medical decision support systems has been hindered by a lack of comprehensive datasets. Many available datasets focus on narrow prediction tasks and do not include a diverse range of data types, which limits…
Database
Open Access
Image-derived cardiomegaly biomarker values for 96K chest X-rays in MIMIC-CXR/MIMIC-CXR-JPG
Cardiomegaly is a condition characterized by an abnormal enlargement of the heart, its identification is of paramount importance as it associate with a wide range of cardiac conditions. It is primary identified via the cardiothoracic ratio (CTR), ho…