Resources
165 results for "mimic"
Model
Credentialed Access
Clinical-T5: Large Language Models Built Using MIMIC Clinical Text
Recent advances in scaling large language models (LLMs) has resulted in significant improvements over a number of natural language processing benchmarks. There has been some work to pretrain these language models over clinical text. These works demo…
Database
Credentialed Access
Nosocomial Risk Datasets from MIMIC-III
Reliable longitudinal risk prediction for hospitalized patients is needed to provide quality care. Our goal is to foster the development of generalizable models capable of leveraging clinical notes to predict healthcare-associated diseases 24–96 hou…
Database
Credentialed Access
Chest X-ray segmentation images based on MIMIC-CXR
As more and more artificial intelligence (AI) or deep learning technologies have been applied to medical image applications such as radiological finding identification in chest X-rays (CXRs), the interpretability of the prediction model is crucial f…
Database
Credentialed Access
Synthetic Acute Hypotension and Sepsis Datasets Based on MIMIC-III and Published as Part of the Health Gym Project
These two synthetic datasets comprise vital signs, laboratory test results, administered fluid boluses and vasopressors for 3,910 patients with acute hypotension and for 2,164 patients with sepsis in the Intensive Care Unit (ICU). The patient cohort…
Model
Credentialed Access
Clinical BERT Models Trained on Pseudo Re-identified MIMIC-III Notes
This project contains the weights of 7 different BERT models trained over a surrogate re-identified set of MIMIC-III (v1.4) notes. Each model is suitable for direct compatibility with the HuggingFace framework; users can easily load and apply the mo…
Database
Credentialed Access
National Institutes of Health Stroke Scale (NIHSS) Annotations for the MIMIC-III Database
The National Institutes of Health Stroke Scale (NIHSS) is a 15-item neurologic examination stroke scale. It quantifies the physical manifestations of neurological deficits and provides crucial support for clinical decision making and early-stage eme…
Database
Credentialed Access
Annotated Question-Answer Pairs for Clinical Notes in the MIMIC-III Database
Clinical question answering (QA) (or reading comprehension) aims to automatically answer questions from medical professionals based on clinical texts. We release this dataset, which contains 1287 annotated QA pairs on 36 sampled discharge summaries …
Model
Credentialed Access
Transformer models trained on MIMIC-III to generate synthetic patient notes
Natural Language Processing can help to unlock knowledge in the vast troves of unstructured clinical data that are collected during patient care. Patient confidentiality presents a barrier to the sharing and analysis of such data, however, meaning t…
Database
Credentialed Access
Phenotype Annotations for Patient Notes in the MIMIC-III Database
A crucial step within secondary analysis of electronic health records (EHRs) is to identify the patient cohort under investigation. While EHRs contain medical billing codes that aim to represent the conditions and treatments patients may have, much …
Database
Open Access
Clinical data from the MIMIC-II database for a case study on indwelling arterial catheters
This dataset was created for the purpose of a case study in the book: Secondary Analysis of Electronic Health Records, published by Springer in 2016. In particular, the dataset was used throughout Chapter 16 (Data Analysis) by Raffa J. et al. to inv…