Resources
173 results for "model"
Database
Credentialed Access
MIMIC-III-Ext-MIMIC-Patient: Structured Per-Patient JSON Records for Clinical Question Answering
This project provides MIMIC-Patient, a structured, per-patient representation of the MIMIC-III database designed for large language model (LLM)–based clinical question answering. For each of 500 admissions, we reconstruct the patient’s episode into …
Database
Credentialed Access
MIMIC-III-Ext-SBDH: An annotated social and behavioral determinants of health dataset
This study presents MIMIC-III-Ext-SBDH, a manually reviewed and consolidated annotation dataset of social and behavioral determinants of health (SBDH) derived from clinical notes in the MIMIC-III database. We previously developed SBDH-Reader, a larg…
Database
Credentialed Access
MIMIC-III-Ext-VeriFact-BHC: Labeled Propositions From Brief Hospital Course Summaries for Long-form Clinical Text Evaluation
The VeriFact-BHC dataset is designed to verify the factuality of long-form text written about a patient against their own electronic health record. There is increasing interest in using large language models (LLMs) to generate clinical text in patie…
natural language processing
clinical informatics
formal logic
chart review
text embedding
brief hospital course
long-form text
logical atomism
retrieval-augmented generation
text reranking
clinical medicine
atomic claim
fact verification
hybrid retrieval
llm-as-a-judge
llm evaluation
clinical notes
large language models
electronic health records
artificial intelligence
Database
Contributor Review
Medical Information Mart for Intensive Care Brazil (MIMIC-BR): a Brazilian Dataset of Anonymized Hospital and ICU Clinical Data
Medical Information Mart for Intensive Care Brazil (MIMIC-BR) is a database of anonymized clinical data from ICU and hospital admissions in Brazil. The dataset format and intended use match the original large, freely available database comprising de…
Database
Credentialed Access
Insulin4RL: Real-Time Insulin Infusions For Offline Reinforcement Learning
Offline reinforcement learning (RL) holds promise for improving healthcare decision-making. However, most existing approaches rely on discretising patient trajectories into strictly regular time intervals. This is done to improve compatibility with …
Database
Credentialed Access
MIMIC-CXR-Ext-ILS: Lesion Segmentation Masks and Instruction-Answer Pairs for Chest X-rays
The applicability of current lesion segmentation models for chest X-rays (CXRs) has been limited both by a small number of target labels and the reliance on complex, expert-level text inputs, creating a barrier to practical use. To address these lim…
Database
Credentialed Access
MIMIC-IV-Ext-CLIF: MIMIC-IV in the Common Longitudinal ICU data Format (CLIF)
MIMIC-IV-Ext-CLIF is a derived dataset of MIMIC-IV v3.1, transformed into the Common Longitudinal ICU data Format (CLIF). CLIF is an open-source critical care data model developed by a consortium of more than 10 US academic medical centers to standa…
Database
Credentialed Access
MIMIC-IV-Ext-PE: Pulmonary Embolism Labels for CT Pulmonary Angiography Radiology Reports
Pulmonary embolism (PE) is a leading cause of preventable in-hospital mortality. Advances in diagnosis, risk stratification, and prevention can improve outcomes. Large, publicly available datasets are needed to move research forward but are lacking …
Database
Open Access
Respiratory and Pulse Oximetry Waveforms from Healthy Adults During Simulated Apnoea Events
This dataset contains airway gauge pressure, inspiratory differential pressure, and pulse oximetry waveforms collected from 20 healthy adult participants (10 females, 10 males) during simulated obstructive sleep apnoea (OSA) trials. Recordings inclu…
Database
Open Access
Neurophysiological Dataset of Stress Resilience During Human-Computer Interaction
This dataset provides multimodal neurophysiological and physiological recordings collected to investigate stress resilience. It comprises electroencephalography, functional near-infrared spectroscopy, electrodermal activity, blood volume pulse, inte…