Resources


Database Credentialed Access

TherLid: A Thermometry Linked Dataset

Jeremy Tan, Inês Martins, João Matos, Tiago Filipe Sousa Gonçalves, Tetsu Ohnuma, Jaime dos Santos Cardoso, Leo Anthony Celi, Vijay Krishnamoorthy, Andrea Lane, An Kwok Wong

TherLiD is an open-source dataset of 13,251 paired temperature readings (contact and infrared) from MIMIC-IV and eICU databases. With added demographics and derived data, it supports research on racial and ethnic disparities in infrared thermometry.

thermometry intensive care unit health equity electronic health records

Published: Jan. 21, 2025. Version: 1.0.0

Database Credentialed Access

FFA-IR: Towards an Explainable and Reliable Medical Report Generation Benchmark

Mingjie Li, Wenjia Cai, Rui Liu, Yuetian Weng, Tengfei Liu, Cong Wang, xin chen, zhong liu, Caineng Pan, Mengke Li, yingfeng zheng, Yizhi Liu, Flora Salim, Karin Verspoor, Xiaodan Liang, Xiaojun Chang

Benchmark dataset for report generation based on fundus fluorescein angiography images and reports.

fundus fluorescein angiography medical report generation vision and language explainable and reliable evaluation

Published: Jan. 21, 2025. Version: 1.1.0

Database Open Access

SensSmartTech database of cardiovascular signals synchronously recorded by an electrocardiograph, phonocardiograph, photoplethysmograph and accelerometer

Aleksandar Lazović, Predrag Tadić, Natalija Đorđević, Vladimir Atanasoski, Masa Tiosavljevic, Marija Ivanovic, Ljupco Hadzievski, Arsen Ristic, Vladan Vukcevic, Jovana Petrovic

SensSmartTech is a unique multiparametric dataset recorded systematically at rest and during the relaxation after activity. It contains the simultaneously recorded electrocardiogram, phonocardiogram, arterial plethysmograms and seismocardiogram.

Published: Dec. 19, 2024. Version: 1.0.0

Visualize waveforms

Database Contributor Review

COVID Data for Shared Learning (CDSL): A comprehensive, multimodal COVID-19 dataset from HM Hospitales

Álvaro Ritoré, Andreea M Oprescu, Alberto Estirado Bronchalo, Miguel Ángel Armengol de la Hoz

COVID Data for Shared Learning (CDSL) is a multimodal database comprising de-identified structured health data and radiological images from 4,479 patients with COVID-19, as a comprehensive toolkit for developing predictive models.

covid-19 multimodal database radiological images open data healthcare data machine learning and ai

Published: Oct. 25, 2024. Version: 1.0.0

Database Credentialed Access

EHRXQA: A Multi-Modal Question Answering Dataset for Electronic Health Records with Chest X-ray Images

Seongsu Bae, Daeun Kyung, Jaehee Ryu, Eunbyeol Cho, Gyubok Lee, Sunjun Kweon, Jungwoo Oh, Lei JI, Eric Chang, Tackeun Kim, Edward Choi

We present EHRXQA, the first multi-modal EHR QA dataset combining structured patient records with aligned chest X-ray images. EHRXQA contains a comprehensive set of QA pairs covering image-related, table-related, and image+table-related questions.

question answering chest x-ray benchmark evaluation multi-modal question answering ehr question answering semantic parsing machine learning electronic health records deep learning visual question answering

Published: July 23, 2024. Version: 1.0.0

Database Credentialed Access

MIMIC-Ext-MIMIC-CXR-VQA: A Complex, Diverse, And Large-Scale Visual Question Answering Dataset for Chest X-ray Images

Seongsu Bae, Daeun Kyung, Jaehee Ryu, Eunbyeol Cho, Gyubok Lee, Sunjun Kweon, Jungwoo Oh, Lei JI, Eric Chang, Tackeun Kim, Edward Choi

We introduce MIMIC-Ext-MIMIC-CXR-VQA, a complex, diverse, and large-scale dataset designed for Visual Question Answering (VQA) tasks within the medical domain, focusing primarily on chest radiographs.

question answering chest x-ray benchmark evaluation radiology machine learning electronic health records deep learning multimodal visual question answering

Published: July 19, 2024. Version: 1.0.0

Database Credentialed Access

mBRSET, a Mobile Brazilian Retinal Dataset

Luis Filipe Nakayama, Lucas Zago Ribeiro, David Restrepo, Nathan Santos Barboza, Raul Dias Fiterman, Maria luiza Vieira Sousa, Alexandre Durao Alves Pereira, Caio Regatieri, Fernando Korn Malerbi, Rafael Andrade

mBRSET - a Mobile Brazilian Retinal Dataset

ophthalmology retina

Published: June 26, 2024. Version: 1.0

Database Open Access

PADS - Parkinsons Disease Smartwatch dataset

Julian Varghese, Alexander Brenner, Lucas Plagwitz, Catharina van Alen, Michael Fujarski, Tobias Warnecke

The PADS dataset contains smartwatch-based records from interactive neurological assessments of Parkinsons disease patients, differential diagnoses and healthy controls. The data is complemented with non-motor symptoms and medical history information

wearables movement disorders parkinsons disease

Published: March 25, 2024. Version: 1.0.0

Database Open Access

Respiratory and heart rate monitoring dataset from aeration study

Ella Frances Sophia Guy, Isaac Flett, Jaimey Anne Clifton, Trudy Caljé-van der Klei, Rongqing Chen, Jennifer Knopp, Knut Moeller, James Geoffrey Chase

Respiratory and cardiovascular data collected from 20 subjects. Pressure, flow, aeration, and heart-rate data were collected during trials which included resting breathing, CPAP at varied PEEP settings, breath-holds, and forced expiratory manoeuvres.

Published: March 20, 2024. Version: 1.0.0

Database Credentialed Access

EchoNotes Structured Database derived from MIMIC-III (ECHO-NOTE2NUM)

Gloria Hyunjung Kwak, Dana Moukheiber, Mira Moukheiber, Lama Moukheiber, Sulaiman Moukheiber, Neel Butala, Leo Anthony Celi, Christina Chen

A structured echocardiogram database derived from 43,472 observational notes obtained during echocardiogram studies conducted in the intensive care unit at the Beth Israel Deaconess Medical Center between 2001 and 2012.

Published: Feb. 23, 2024. Version: 1.0.0