Resources


Database Open Access

Multilevel Monitoring of Activity and Sleep in Healthy People

Alessio Rossi, Eleonora Da Pozzo, Dario Menicagli, Chiara Tremolanti, Corrado Priami, Alina Sirbu, David Clifton, Claudia Martini, David Morelli

Multilevel Monitoring of Activity and Sleep in Healthy people (MMASH) dataset provides 24 hours of continuous beat-to-beat heart data, triaxal accelerometer data, sleep quality, physical activity, psychological characteristics and salivary samples.

sleep physiological response melatonin cortisol circadian rhythm psychological response saliva health

Published: June 19, 2020. Version: 1.0.0

Database Credentialed Access

Phenotype Annotations for Patient Notes in the MIMIC-III Database

Edward Moseley, Leo Anthony Celi, Joy Wu, Franck Dernoncourt

Clinical notes, annotated by at least two expert annotators for over ten patient phenotypes, including advanced cancer, substance abuse, and treatment non-adherence.

patient classification natural language processing

Published: March 5, 2020. Version: 1.20.03

Database Open Access

Tappy Keystroke Data

This is the keystroke dataset for the study titled 'High-accuracy detection of early Parkinson's Disease using multiple characteristics of finger movement while typing'. This research report is currently under review for publication by P…

parkinsons neuroelectric movement

Published: Oct. 20, 2017. Version: 1.0.0

Database Open Access

Clinical data from the MIMIC-II database for a case study on indwelling arterial catheters

Jesse Raffa

Dataset extracted from MIMIC-II for a tutorial on effectiveness of indwelling arterial catheters in hemodynamically stable patients with respiratory failure for mortality outcomes.

Published: Oct. 28, 2016. Version: 1.0

Challenge Credentialed Access

ShAReCLEF eHealth 2013: Natural Language Processing and Information Retrieval for Clinical Care

Danielle Mowery

2013 ShARe/CLEF eHealth Evaluation Lab: Natural Language Processing and Information Retrieval for Clinical Care (Tasks 1 and 2).

natural language processing

Published: Feb. 15, 2013. Version: 1.0

Database Credentialed Access

CXReasonBench: A Benchmark for Evaluating Structured Diagnostic Reasoning in Chest X-rays

Hyungyung Lee, Geon Choi, Jung Oh Lee, Hangyul Yoon, Hyuk Gi Hong, Edward Choi

CheXStruct is an automated pipeline that derives structured diagnostic reasoning steps from chest X-rays. CXReasonBench builds on this to evaluate whether models perform clinically grounded, multi-step reasoning beyond final diagnoses.

evaluation chest x-ray benchmark structured chest x-ray qa intermediate reasoning steps structured reasoning grounded reasoning diagnostic reasoning structured diagnostic pipeline

Published: Oct. 23, 2025. Version: 1.0.1

Model Credentialed Access

RadVLM model

Nicolas Deperrois, Hidetoshi Matsuo, Samuel Ruiperez-Campillo, Moritz Vandenhirtz, Sonia Laguna, Alain Ryser, Koji Fujimoto, Mizuho Nishio, Thomas Sutter, Julia Vogt, Jonas Kluckert, Thomas Frauenfelder, Christian Bluethgen, Farhad Nooralahzadeh, Michael Krauthammer

RadVLM is a 7B-parameter vision-language model fine-tuned on public chest-X-ray data that drafts reports, lists abnormalities, grounds findings, and chats about a CXR through a single image-to-text interface.

Published: Oct. 8, 2025. Version: 1.0.0

Database Restricted Access

Organ Retrieval and Collection of Health Information for Donation (ORCHID)

Hammaad Adam, Vinith Suriyakumar, Tom Pollard, Benjamin Moody, Jennifer Erickson, Greg Segal, Brad Adams, Diane Brockmeier, Kevin Lee, Ginny McBride, Kelly Ranum, Matthew Wadsworth, Janice Whaley, Ashia Wilson, Marzyeh Ghassemi

Multi-center dataset on organ procurement in the United States

organ procurement organizations organ transplantation

Published: Sept. 29, 2025. Version: 2.1.1

Database Credentialed Access

Multimodal Clinical Monitoring in the Emergency Department (MC-MED)

Aman Kansal, Emma Chen, Tom Jin, Pranav Rajpurkar, David Kim

A multimodal dataset of deidentified clinical and physiological data from emergency department visits, supporting research on patient outcomes, care processes, and the effects of continuous monitoring during and after the COVID-19 pandemic.

Published: Sept. 25, 2025. Version: 1.0.1

Challenge Credentialed Access

SNOMED CT Entity Linking Challenge

Will Hardman, Mark Banks, Rory Davidson, Donna Truran, Nindya Widita Ayuningtyas, Hoa Ngo, Alistair Johnson, Tom Pollard

272 discharge notes from the MIMIC-IV-Note dataset annotated with SNOMED CT concepts.

snomed entity linking clinical annotation

Published: July 22, 2025. Version: 1.1.0