Resources
309 results for "dataset"
Database
Credentialed Access
MIMIC-III-Ext-VeriFact-BHC: Labeled Propositions From Brief Hospital Course Summaries for Long-form Clinical Text Evaluation
The VeriFact-BHC dataset is designed to verify the factuality of long-form text written about a patient against their own electronic health record. There is increasing interest in using large language models (LLMs) to generate clinical text in patie…
natural language processing
clinical informatics
formal logic
chart review
text embedding
brief hospital course
long-form text
logical atomism
retrieval-augmented generation
text reranking
clinical medicine
atomic claim
fact verification
hybrid retrieval
llm-as-a-judge
llm evaluation
clinical notes
large language models
electronic health records
artificial intelligence
Database
Contributor Review
BIDMC Metabolomic Cohort of Adults with Biopsy-Proven MASLD
Metabolic dysfunction-associated steatotic liver disease (MASLD), including its progressive form metabolic dysfunction-associated steatohepatitis (MASH), is the leading cause of chronic liver disease. Accurate delineation of the metabolites and sign…
Database
Credentialed Access
MIMIC-IV-Ext-CLIF: MIMIC-IV in the Common Longitudinal ICU data Format (CLIF)
MIMIC-IV-Ext-CLIF is a derived dataset of MIMIC-IV v3.1, transformed into the Common Longitudinal ICU data Format (CLIF). CLIF is an open-source critical care data model developed by a consortium of more than 10 US academic medical centers to standa…
Database
Open Access
Brugada-HUCA: 12-Lead ECG Recordings for the Study of Brugada Syndrome
We present a novel dataset of 12-lead electrocardiogram (ECG) recordings developed to support the study and classification of Brugada syndrome, a rare but potentially fatal cardiac arrhythmia. The data were collected retrospectively from patients ev…
Database
Open Access
tOLIet: Single-lead Thigh-based Electrocardiography Using Polimeric Dry Electrodes
Our team previously introduced an innovative concept for an "invisible" Electrocardiography (ECG) system, incorporating electrodes and sensors into a toilet seat design to enable signal acquisition from the thighs. Building upon that work, we now pr…
Database
Credentialed Access
MIMIC-IV-Ext clinical decision support for referral, triage and diagnosis
Accurate medical decision-making is critical for both patients and clinicians. Patients often find it difficult to interpret their symptoms, determine their severity, and select the right specialist to see. At the same time, clinicians face challeng…
Database
Open Access
MIMIC-IV demo data in the Medical Event Data Standard (MEDS)
This dataset is an automated ETL conversion of the MIMIC-IV Clinical Database Demo into the Medical Event Data Standard (MEDS). MEDS is a data schema for storing streams of medical events such as those sourced from Electronic Health Records or claim…
Database
Credentialed Access
MIMIC-Ext-DrugDetection
This project shares a large, annotated drug detection dataset created from MIMIC-III/IV discharge summaries. The dataset was developed to address the challenge of identifying substance use behaviors in Electronic Health Records (EHRs), where critica…
Database
Restricted Access
Community-Acquired Pneumonia, Endotypes and Phenotypes (NACef): Prospective, observational cohort study of Translational Medicine
Community-Acquired Pneumonia (CAP) remains a prominent infectious process associated with elevated in-hospital morbidity and mortality rates. Through the exploration of phenotypes, endotypes, and biomarkers, it becomes feasible to identify individua…
Database
Credentialed Access
CXR-Align: A Benchmark for CXR-Report Alignment with Negations
CXR-Align is a benchmark dataset designed to evaluate vision-language processing (VLP) models' ability to accurately interpret negations in chest X-ray (CXR) reports. Negations are prevalent in medical documentation and pose significant challenges f…