Resources


Database Credentialed Access

Phenotype Annotations for Patient Notes in the MIMIC-III Database

Edward Moseley, Leo Anthony Celi, Joy Wu, Franck Dernoncourt

Clinical notes, annotated by at least two expert annotators for over ten patient phenotypes, including advanced cancer, substance abuse, and treatment non-adherence.

patient classification natural language processing

Published: March 5, 2020. Version: 1.20.03

Database Open Access

Cerebral Vasoregulation in Diabetes

Vera Novak, Laura Mendez

Diabetes is a risk factor for cerebral hypoperfustion and microvascular disease. This study assessed the effects of diabetic autonomic neuropathy with OH on cerebral vasoregulation.

perfusion-arterial spin labeling mri cerebral vasoregulation white matter hyperintensities orthostatic hypotension cerebral blood flow- transcranial doppler type 2 diabetes

Published: Jan. 30, 2020. Version: 1.0.0

Visualize waveforms

Challenge Open Access

WiDS (Women in Data Science) Datathon 2020: ICU Mortality Prediction

Meredith Lee, Jesse Raffa, Marzyeh Ghassemi, Tom Pollard, Sharada Kalanidhi, Omar Badawi, Karen Matthys, Leo Anthony Celi

WiDS (Women in Data Science) Datathon 2020: ICU Mortality Prediction focuses on patient health. Join a team, explore the data, and share your insights: http://bit.ly/WiDSdatathon2020

mortality risk icu challenge data science kaggle predictive analytics women in data science

Published: Jan. 22, 2020. Version: 1.0.0

Database Credentialed Access

MedNLI for Shared Task at ACL BioNLP 2019

Chaitanya Shivade

Data for the MedNLI Shared Task at the 2019 ACL BioNLP 2019 Workshop on Biomedical Language Processing

recognizing textual entailment mimic natural language inference

Published: Nov. 28, 2019. Version: 1.0.1

Database Credentialed Access

MIMIC-CXR-JPG - chest radiographs with structured labels

Alistair Johnson, Matt Lungren, Yifan Peng, Zhiyong Lu, Roger Mark, Seth Berkowitz, Steven Horng

Chest x-rays in JPG format with structured labels derived from the associated radiology report.

mimic computer vision radiology chest x-ray deep learning

Published: Nov. 14, 2019. Version: 2.0.0

Database Open Access

Wilson Central Terminal ECG Database

Hossein Moeinzadeh, Gaetano Gargiulo

Wilson Central Terminal ECG signals recorded from 92 patients.

wilson central terminal limb potential ecg electrocardiography unipolar lead

Published: Nov. 13, 2019. Version: 1.0.1

Visualize waveforms

Database Open Access

Permittivity of Healthy and Diseased Skeletal Muscle

Benjamin Sanchez

Conductivity and relative permittivity of healthy and diseased skeletal muscle.

permittivity neuromuscular disorders skeletal muscle anisotropy

Published: Nov. 12, 2019. Version: 1.1

Database Open Access

Motion and heart rate from a wrist-worn wearable and labeled sleep from polysomnography

Olivia Walch

Motion data and heart rate measurements from Apple Watches from sleeping people undergoing polysomnography.

sleep polysomnography

Published: Oct. 8, 2019. Version: 1.0.0

Database Credentialed Access

MedNLI - A Natural Language Inference Dataset For The Clinical Domain

Chaitanya Shivade

This is a resource for training machine learning models for language inference in the medical domain.

recognizing textual entailment natural language inference

Published: Oct. 1, 2019. Version: 1.0.0

Database Credentialed Access

MIMIC-CXR Database

Alistair Johnson, Tom Pollard, Roger Mark, Seth Berkowitz, Steven Horng

Chest radiographs in DICOM format with associated free-text reports.

mimic chest x-rays computer vision radiology machine learning natural language processing

Published: Sept. 19, 2019. Version: 2.0.0