Resources


Database Credentialed Access

MIMIC-IV-ECHO-Ext-MIMICEchoQA: A Benchmark Dataset for Echocardiogram-Based Visual Question Answering

Rahul Thapa, Andrew Li, Qingyang Wu, et al.

We present MIMICEchoQA, a benchmark dataset for echocardiogram-based question answering, built from the publicly available MIMIC-IV-ECHO database.

Published: Oct. 7, 2025. Version: 1.0.0

Database Open Access

MIMIC-IV demo data in the Medical Event Data Standard (MEDS)

Robin Philippus van de Water, Ethan Steinberg, Michael Wornow, et al.

MIMIC-IV Clinical Database Demo in MEDS (Medical Event Data Standard) format.

ehr critical care electronic health record mimic meds medical event data standard machine learning

Published: Sept. 29, 2025. Version: 0.0.1

Database Credentialed Access

MIMIC-Ext-DrugDetection

Fabrice Harel-Canada, Nanyun Peng, David Goodman, et al.

This project offers a multilabel annotated dataset of clinical note sentences from MIMIC-III/IV for substance use detection. It supports NLP research for identifying various co-occurring drug use mentions in patient records.

ehr mimic-iv substance use mimic-iii methamphetamine multi-label cocaine drug detection polysubstance use prescription opioid misuse cannabis benzodiazepine misuse injection drug use heroin clinical notes

Published: Sept. 25, 2025. Version: 1.0.0

Database Credentialed Access

Immunosuppressive Condition and Medication Annotations for Admission Notes in the MIMIC-III Database

Vijeeth Guggilla, Melissa Bak, Mengjia Kang, et al.

This database contains 200 MIMIC-III admission notes with adjudicated labels for histories of various immunosuppressive conditions and usage of various immunosuppressive medications.

Published: Aug. 4, 2025. Version: 1.0.0

Database Credentialed Access

MIMIC-III-Ext-tPatchGNN

Chenlong Yin, Weijia Zhang

The processed MIMIC-III dataset for the benchmark of Irregular Multivariate Time Series Forecasting: A Transformable Patching Graph Neural Networks Approach.

Published: April 9, 2025. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext-BHC: Labeled Clinical Notes Dataset for Hospital Course Summarization

Asad Aali, Dave Van Veen, Yamin Arefeen, et al.

This dataset presents a collection of preprocessed and labeled clinical notes derived from "MIMIC-IV-Note", and aims to facilitate the development of ML models focused on summarizing brief hospital courses (BHC) from clinical notes.

natural language processing text summarization clinical notes brief hospital course machine learning

Published: Feb. 3, 2025. Version: 1.2.0

Database Restricted Access

MIMIC-IV-Ext-DiReCT

Bowen Wang, Jiuyang Chang, Yiming Qian

A diagnostic reasoning dataset designed to evaluate the performance of large language models in aligning with human doctors when making diagnoses from clinical notes.

Published: Jan. 21, 2025. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext-GPT-3_5-Generated-Discharge-Summaries-for-Low-Resource-Codes

Matúš Falis, Aryo Pradipta Gema, Hang Dong, et al.

9,606 Synthetic Discharge Summaries generated by GPT-3.5 based on combinations of ICD-10-code descriptions associated with real discharge summaries in MIMIC-IV. Focus on low resource codes.

icd coding large language model data augmentation

Published: Dec. 16, 2024. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext-MDS-ED: Multimodal Decision Support in the Emergency Department - a Benchmark Dataset for Diagnoses and Deterioration Prediction in Emergency Medicine

Juan Miguel Lopez Alcaraz, Nils Strodthoff

MIMIC-IV-ext-MDS-ED proposes a dataset to benchmark multimodal decision support in the emergency department. It features multimodal input (including ECG waveforms) and a comprehensive set of prediction targets (diagnoses and deterioration prediction)

emergency department diagnoses prediction deterioration prediction benchmark multimodal ecg

Published: Sept. 12, 2024. Version: 1.0.0

Database Open Access

Image-derived cardiomegaly biomarker values for 96K chest X-rays in MIMIC-CXR/MIMIC-CXR-JPG

Benjamin Duvieusart, Felix Krones, Guy Parsons, et al.

Automatically extracted cardiomegaly biomarkers - cardiothoracic ratio (CTR) and cardiopulmonary area ratio (CPAR) - for all posterior-anterior chest x-ray scans in MIMIC-CXR/MIMIC-CXR-JPG.

mimic-cxr biomarkers cpar ctr cardiomegaly

Published: Aug. 23, 2024. Version: 1.0.0