Resources


Database Credentialed Access

Deidentified Medical Text

Margaret Douglass, Bill Long, George Moody, Peter Szolovits, Li-wei Lehman, Roger Mark, Gari Clifford

Gold standard corpus of 2,434 deidentified nursing notes

medical text nursing notes de-identification hipaa

Published: Dec. 18, 2007. Version: 1.0

Database Credentialed Access

MIMIC-CXR Database

Alistair Johnson, Tom Pollard, Roger Mark, Seth Berkowitz, Steven Horng

Chest radiographs in DICOM format with associated free-text reports.

mimic natural language processing machine learning chest x-rays computer vision radiology

Published: Sept. 19, 2019. Version: 2.0.0

Database Credentialed Access

MIMIC-CXR-JPG - chest radiographs with structured labels

Alistair Johnson, matt lungren, Yifan Peng, Zhiyong Lu, Roger Mark, Seth Berkowitz, Steven Horng

Chest x-rays in JPG format with structured labels derived from the associated radiology report.

mimic computer vision radiology deep learning chest x-ray

Published: Nov. 14, 2019. Version: 2.0.0

Database Open Access

PhysioZoo - mammalian NSR databases

Ori Shemla, Joachim Behar

PhysioZoo is a collaborative platform dedicated to the study of the heart rate variability in electrophysiological recordings from mammals

ecg heart rate variabillity electrophysiology mammals

Published: Aug. 27, 2019. Version: 1.0.0

Visualize waveforms

Database Open Access

MIMIC-III Clinical Database Demo

Alistair Johnson, Tom Pollard, Roger Mark

An open source demo of the MIMIC-III Clinical Database

critical care mimic electronic health records

Published: April 24, 2019. Version: 1.4

Software Open Access

De-Identification Software Package

The deid software package includes code and dictionaries for automated location and removal of protected health information (PHI) in free text from medical records.

anonymization deidentification phi

Published: Dec. 18, 2007. Version: 1.1

Software Open Access

plt - Software for 2D Plots

plt is a non-interactive plotting utility originally written for Unix by Paul Albrecht. plt can produce publication-quality 2D plots in PostScript from easily-produced text or binary data files, and can also create screen plots under the X Window Sy…

multiparameter visualization

Published: Nov. 7, 2002. Version: 2.5

Database Open Access

Santa Fe Time Series Competition Data Set B

This is a multivariate data set recorded from a patient in the sleep laboratory of the Beth Israel Hospital (now the Beth Israel Deaconess Medical Center) in Boston, Massachusetts. This data set was extracted from record slp60 of the MIT-BIH Polysom…

sleep multiparameter

Published: Jan. 6, 2000. Version: 1.0.0

Challenge Open Access

Is the normal heart rate chaotic?

George Moody

In its June 2008 issue, the editors of Chaos announced a new feature, "Controversial Topics in Nonlinear Dynamics". The first controversial topic to be aired is "Is the Normal Heart Rate Chaotic?". This project provides data to explore this question.

Published: Oct. 30, 2008. Version: 1.0.0

Database Open Access

Gait Maturation Database

The data contained here are from 50 healthy children ranging in age from 40 months to 163 months. Each data file is named with a subject identifier (1-50) and the subject's age (e.g., the file name 2-45.txt indicates that subject #2 is 45 months…

gait

Published: Oct. 28, 1999. Version: 1.0.0