Resources
Challenge Credentialed Access
BioNLP Workshop 2023 Shared Task 1A: Problem List Summarization
Yanjun Gao, Dmitriy Dligach, Timothy Miller, Majid Afshar
bionlp clinical natural language processing electronic health record summarization
Published: Nov. 12, 2023. Version: 2.0.0
Model Credentialed Access
Characterization of Stigmatizing Language in Medical Records
Keith Harrigian, Ayah Zirikly, Brant Chee, Alya Ahmad, Anne Links, Somnath Saha, Mary Catherine Beach, Mark Dredze
clinical natural language processing domain transfer bias stigmatizing language large language models mimic
Published: Nov. 6, 2023. Version: 1.0.0
Database Credentialed Access
Nosocomial Risk Datasets from MIMIC-III
Travis Goodwin
pressure injury risk prediction acute kidney injury anemia forecasting natural language processing deep learning
Published: Sept. 15, 2022. Version: 1.0
Database Contributor Review
BRATECA (Brazilian Tertiary Care Dataset): a Clinical Information Dataset for the Portuguese Language
Henrique Dias, Ana Helena Dias Pereira dos Ulbrich
prescriptions exams tertiary care clinical notes natural language processing
Published: July 14, 2022. Version: 1.1
Database Credentialed Access
Paediatric Intensive Care database
Haomin Li, Xian Zeng, Gang Yu
intensive care pediatrics critical care natural language processing
Published: Nov. 12, 2020. Version: 1.1.0
Database Credentialed Access
MIMIC-III Clinical Database
Alistair Johnson, Tom Pollard, Roger Mark
MIMIC-III is a large, freely-available database comprising deidentified health-related data associated with over forty thousand patients who stayed in critical care units of the Beth Israel Deaconess Medical Center between 2001 and 2012. The databas…
intensive care clinical critical care natural language processing machine learning
Published: Sept. 4, 2016. Version: 1.4
Database Credentialed Access
EHR-DS-QA: A Synthetic QA Dataset Derived from Medical Discharge Summaries for Enhanced Medical Information Retrieval Systems
Konstantin Kotschenreuther
mimic-iv clinical question-answering medical discharge summaries large language models
Published: Jan. 11, 2024. Version: 1.0.0
Database Credentialed Access
EHR-DS-QA: A Synthetic QA Dataset Derived from Medical Discharge Summaries for Enhanced Medical Information Retrieval Systems
Konstantin Kotschenreuther
mimic-iv clinical question-answering medical discharge summaries large language models
Published: Jan. 11, 2024. Version: 1.0.0
Database Credentialed Access
CORAL: expert-Curated medical Oncology Reports to Advance Language model inference
Madhumita Sushil, Vanessa Kennedy, Divneet Mandair, Brenda Miao, Travis Zack, Atul Butte
artificial intelligence information extraction oncology natural language processing large language models electronic health records
Published: Feb. 7, 2024. Version: 1.0
Database Credentialed Access
RadCoref: Fine-tuning coreference resolution for different styles of clinical narratives
Yuxiang Liao, Hantao Liu, Irena Spasic
natural language processing coreference resolution radiology
Published: Jan. 30, 2024. Version: 1.0.0